Research Associate II

Job Details

Description
Research Associate II
Department of Animal Science the University of Tennessee

Job Summary:  This position will work with a team of scientists within the Genomics Center for the Advancement of Agriculture to perform a wide variety of computational genomics research related to plant and animal agriculture. The selected applicant will provide bioinformatics support to UTIA faculty, staff, and students. This person will serve as a consultant to faculty and students wishing to implement genomic methods into their research programs. The individual will be responsible for developing, testing, and maintaining bioinformatics databases and pipelines that will be utilized Institute-wide for routine genomics applications. They will assist faculty and graduate students throughout the Institute with experimental design, and follow up with bioinformatics support on a variety of projects spanning many species and data types. This person will also serve as an intermediary between cooperating faculty and the university’s High Performance & Scientific Computing group. In addition to bioinformatics know-how, the ideal candidate will also have the ability to work in a team and effectively communicate with a wide variety of collaborators. They should also be willing to summarize data, assist with interpretation, and develop materials for publications.



Qualifications
Job Functions:
Genomic Data Management and Pipeline Development

    Develop and organize “-omic” databasesGenerate standard operating procedures for routinely processing agricultural genomic dataPerform routine genomic analyses (e.g. genotype calling, differential gene expression, epigenetic peak calling, etc.) Develop flexible computational genomic pipelines
Consulting and Research Support

    Assist with code and software development & troubleshootingInterface with UT High Performance & Scientific Computing group and Office of Information TechnologyAnalyze and summarize collected dataPrepare research reportsAssist with manuscript preparationProvide technical support faculty and graduate studentsDesign and execute experiments in collaboration with UTIA faculty
Preferred Qualifications:

Master of Science in animal science, bioinformatics, computer science, genomics, or other natural or life science and 3 years relevant research experience in the area of  genomics, or bioinformatics;

A PhD in animal science, bioinformatics, computer science, genomics, or other natural or life science with research experience in the area of genomics, or bioinformatics

Minimum Qualifications:

    Advanced knowledge of bioinformatics and computational genomics approachesExperience with reproducible computational workflow development (e.g. Snakemake, Nextflow)Experience with data science (e.g. R, Python, Julia) and machine learning programming  (e.g. Tensorflow, Keras, PyTorch)Experience with data cleaning and wranglingExperience with database programming (i.e. SQL) and managementExperience in a high-performance and/or cloud computing environmentTechnical writing skillsAbility to effectively communicate research methods with individuals or small groupsAbility to execute and oversee research projectsAbility to allocate and coordinate resourcesAbility to oversee and direct the work of designated personnel and/or studentsAbility to multi-task and prioritize
Application: Interested applicants must apply online at https://hr.utk.edu/ and include the following: 1) cover letter stating their experience and possible starting date; 2) resume; 3) academic transcripts from all universities or colleges attended (unofficial transcripts for application are acceptable; official transcripts will be required before hire is completed); and 4) the names, telephone numbers, and e-mail addresses of three professional references. Review of applicants will begin April 16, 2022. Questions may be directed to Dr. Troy Rowan, [email protected].

Salary range: Market Range 09 with benefits. Salary will be based on level of experience.

The University of Tennessee is an EEO/AA/Title VI/Title IX/Section 504/ADA/ADEA institution in the provision of its education and employment programs and services. All qualified applicants will receive equal consideration for employment without regard to race, color, national origin, religion, sex, pregnancy, marital status, sexual orientation, gender identity, age, physical or mental disability, or covered veteran status.



Job: Research Professional
Primary Location: US-Tennessee-knoxville
Organization: Animal Science - Res
Schedule: Full-time
Job Posting: Apr 25, 2022, 3:47:41 PM

Organization

Working at The University of Tennessee, Knoxville

Founded in 1794, the University of Tennessee is one of the nation’s oldest and most storied public universities. Based in Knoxville, Tennessee’s flagship land-grant institution includes the statewide Institute of Agriculture and the Space Institute in Tullahoma. The university embodies excellence in teaching, discovery, scholarship, research, creative activity, outreach, and engagement. Known as the Volunteers, we lead with a spirit of selflessness, empathy, and courage, and strive to be champions for diversity, equity, and inclusion

UT Knoxville is a Research 1 university with 11 academic colleges and more than 900 programs of study. With an enrollment of more than 30,000 students, our academic programs are repeatedly ranked top in their class. The university co-manages Oak Ridge National Laboratory, the country’s most prominent national lab, driving innovation in advanced manufacturing and materials, national security, and more. We are closely connected with our communities through outreach and extension efforts across Tennessee and through partnerships with non-profits, corporations, and industries—regionally, nationally, and around the globe.

The city of Knoxville is nestled in the foothills of the Great Smoky Mountains. The modern, thriving community is surrounded by gorgeous lakes and hundreds of miles of walking, hiking, and biking trails. Situated along the banks of the Tennessee River, our beautiful features an eclectic music scene, internationally recognized festivals, unique restaurants, and a robust offering of diverse cultural activities. Knoxville is located within a day’s drive of Atlanta, Nashville, Asheville, Charlotte, Louisville, Cincinnati, Memphis, Chicago, and Washington D.C.

Knoxville and the surrounding counties have a population of more than 850,000 people. The region houses many leading corporations and organizations, including Oak Ridge National Laboratory, Pilot/Flying J, the Tennessee Valley Authority, and Regal Cinemas, along with HGTV, Food Network, and other networks owned by Discovery Inc.

As a member of the UT family, you will be surrounded by top-notch faculty, staff, and students from around the world. You will be part of a diverse campus community that is passionate about changing the world and cheering for the Vols on game day.

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